Insertion junction: CLIP2.077507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077507
Chromosome:chromosome 3
Location:6520096
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194050 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGTGTAGCGAGCGAGCTTTCCACGAAACAGCTGTACGGCAAGGGCT
Internal bar code:TTATAGGTTTCCCTTTTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4185
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGGGCTGGCATCAAAC
Suggested primer 2:GGGAGTGGTTGATGCCTGAA