Insertion junction: CLIP2.077511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077511
Chromosome:plastome
Location:17376
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802269 ChreCp007,clpP,2717015 (1 of 9) 3.4.21.92 - Endopeptidase Clp / Protease Ti; ATP-dependent Clp protease proteolytic subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAGGATTTTGAAAAGCTTGTTTATTCGCAGAAGATTTAGCAAAATT
Internal bar code:GTTCAGAAGTTTCTTGATGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTTCGTGATGGAACTGG
Suggested primer 2:CAGCAGATGCAGCTACACCT