Insertion junction: CLIP2.077525_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077525
Chromosome:chromosome 17
Location:1747008
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g708650 HFO27,HFO20 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTCCAAACAAACTCGGTGTTTCTCAACACCACCCTCAAACCTCGGGCT
Internal bar code:TTTTCTTAGTAGATGTGAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2387
LEAP-Seq percent confirming:43.9024
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCCAGCAAAGACCCTAA
Suggested primer 2:TCGTTGACTTGGATCCTGCC