Insertion junction: CLIP2.077528_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077528
Chromosome:chromosome 6
Location:3462976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCAGCTTTCCGCTCGCTCGTTCCTGAACGTTCCCAGCAGCATGCTC
Internal bar code:AAATGGTAATTACCTTGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:21.9512
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCATGGGCATAGGGA
Suggested primer 2:GTCCAAGCTACCCCAACCTC