Insertion junction: CLIP2.077533_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077533
Chromosome:chromosome 1
Location:341080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGATGAAGAATCCGCAAGCCGCTGCGGTTGGACTCGTCGGGGGCGCA
Internal bar code:CTTCATTGGGTCTTACCCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1737
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCTACCTGTCCTCCCA
Suggested primer 2:GTTGGTTCCTTCGTGGTTGC