Insertion junction: CLIP2.077534_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077534
Chromosome:chromosome 13
Location:4205317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591550 SRR20 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) PTHR19331//PTHR19331:SF279 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATTCCATCCTGATAACATAGGTCATGTGACGAGCGCTGCTACTTACGA
Internal bar code:TTCGTTCCCAGCTCCTGTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2652
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCGATAAAAGCGAGCAAG
Suggested primer 2:GTCCACGCACAAGTTCACAC