Insertion junction: CLIP2.077537_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077537
Chromosome:chromosome 17
Location:3330908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722650 5'UTR
Cre17.g722675 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACTTCCACTTGCGTTTCAAACTGCGTTTCCAACTGCAGCACCGACAGC
Internal bar code:CGAACCCTCTGCGTTATTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1266
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGTATATGTGCAGGCCC
Suggested primer 2:TCAACCTCAACCCTTCGCTC