Insertion junction: CLIP2.077540_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077540
Chromosome:chromosome 15
Location:1021551
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g639400 (1 of 2) 2.6.99.4 - Transferred entry: 2.3.1.234 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATATCCCCACCAGCAGCCCACCACGCTCCGAACTCCCTGCGTGCAGTAT
Internal bar code:GGGCAGATGAACCTCCGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAATGGGGGAGGAATGGGTG
Suggested primer 2:TACGGTACCAGCAACACCAC