Insertion junction: CLIP2.077545_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077545
Chromosome:chromosome 8
Location:1496242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364800 (1 of 1) 6.3.5.3 - Phosphoribosylformylglycinamidine synthase / Phosphoribosylformylglycinamidine synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGTTTATGTTCGTCCCCTCGCACAACCGATTGACCCCTGTGCAGTA
Internal bar code:AAGTGTTAGTTGGGTTGCAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:46.4286
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACAACAGCAACACGGAACC
Suggested primer 2:AGCTAGAGGGAGCCATGGAA