Insertion junction: CLIP2.077555_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077555
Chromosome:chromosome 3
Location:5077296
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g180151 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCCTCCTGCCCCAGCCCCGGCTACAGCCGCACGCCCATCTCCGCCG
Internal bar code:AACTGACGGTCTTTAAACACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:545
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTCCAAGCACCTTTCCG
Suggested primer 2:GTACGCGCAGAACATTCGTC