Insertion junction: CLIP2.077581_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077581
Chromosome:chromosome 6
Location:6266246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g292350 AOC4 (1 of 1) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED; Amino acid carrier 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCAACAAAGCTTTGAACAGATATCACCATTACCGCGACCACATTAA
Internal bar code:GTAACCTTGGGGCGGGGTAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1140
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACACACCAGTTCGTCAG
Suggested primer 2:AATTTTCGGGGGCATAGGCA