Insertion junction: CLIP2.077583_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077583
Chromosome:chromosome 3
Location:2552697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACAAACTACTCCTTCAAGCCTCTCGACGCTTGTTCCTCAGTCCCGA
Internal bar code:ACTCGAATCCGCGTATTATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:166
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:166

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGTAACGTTGATGCCA
Suggested primer 2:GCAGGCTGCTGATGTATTGC