Insertion junction: CLIP2.077584_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077584
Chromosome:chromosome 15
Location:5564134
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre46.g761047 (1 of 3) IPR000104//IPR027417 - Antifreeze protein, type I // P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAAAACGTTGCGCAAAGACAGTGTATGCGATGCAGCAAAGCGACGGT
Internal bar code:CACGTGGTTGGTCCGCGTACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2248
LEAP-Seq percent confirming:45.1613
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCTAACATGTTCCTTCG
Suggested primer 2:GTGTGTGTGTGTGGATGTGC