Insertion junction: CLIP2.077590_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077590
Chromosome:plastome
Location:80274
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802297 psbB,2717002,ChreCp032 (1 of 1) K02704 - photosystem II CP47 chlorophyll apoprotein (psbB); photosystem II P680 chlorophyll A apoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGGTATTGCTTCACACCACATCGCAGCTGGTATTTTAGGTGTTTTA
Internal bar code:GTACGGATTTCTCTTCAGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGCATACGACGAACGA
Suggested primer 2:GTTGGGCAGGTTCTATGGCT