Insertion junction: CLIP2.077594_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077594
Chromosome:chromosome 12
Location:682771
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g493050 intron
Cre12.g801351 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTATATTGAAGACAACGATCCGTCACAAGGCAATTGATCACCGCTCG
Internal bar code:CGAGGGCTACATATTTTCTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:46.875
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTCAGCTTCATCACCAT
Suggested primer 2:GCGCGTTTGTCATGATACCC