Insertion junction: CLIP2.077601_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077601
Chromosome:chromosome 17
Location:6018619
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g742700 CGLD30,HLM32 (1 of 1) PTHR22884:SF343 - PROTEIN MET-1, ISOFORM A; SET domain containing protein, putative histone methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCATGGTTGCAGCTGATCCGCAGTGCGCAGATCACCTCCAACTGCG
Internal bar code:GGGATCGAGATATTGACGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGACGGCGATCTTGTA
Suggested primer 2:AAGCAGACAGTACTGGCCAC