Insertion junction: CLIP2.077602_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077602
Chromosome:chromosome 3
Location:1673559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153050 RWP1 (1 of 1) IPR000104//IPR003035 - Antifreeze protein, type I // RWP-RK domain; RWP-RK transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCGTGGCCTACAAGGAGGAAACTCCTTCCTTGCTTAGCGCACAGAC
Internal bar code:GGGGAAGGCCAGTTGTATCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4891
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAAAGCGCTGCACAACA
Suggested primer 2:GTGTCGTTGCCCTCTTAGCT