Insertion junction: CLIP2.077603_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077603
Chromosome:chromosome 1
Location:7419942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052350 MRPL20,bL20m (1 of 1) K02887 - large subunit ribosomal protein L20 (RP-L20, MRPL20, rplT); Mitochondrial ribosomal protein L20 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTATATCATTTTTATAGTCAAGTATACACTAATTGCGACAGCGCGCC
Internal bar code:TGTGCTGTAATAGTCCGTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1316
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTAATGAATCCTCGGCC
Suggested primer 2:CTTAAAGCTGAACGGCTCGC