Insertion junction: CLIP2.077604_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077604
Chromosome:chromosome 13
Location:3159493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAGGGTCATGATGCCGCAATCCATTCCATACGCCTTAACCCGCATCC
Internal bar code:AAGTGCTCGTGGGTTTGGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1119
LEAP-Seq percent confirming:92.4528
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGGCCAGTCTTTCAGGTC
Suggested primer 2:CGCCACTCACTGACATCACT