Insertion junction: CLIP2.077607_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077607
Chromosome:chromosome 7
Location:362215
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g314650 RECA1,RECA,EZY19 Chloroplast RecA recombination protein; (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCATCATGCGTCTCAGCGACAGCGTCACGGCGAACATGTGAGTCTACG
Internal bar code:GTTATACAGGGGGCCAAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGGTGTTGCAAAGAGA
Suggested primer 2:GTAATAAACCGCTGCCGCTG