Insertion junction: CLIP2.077609_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077609
Chromosome:plastome
Location:99705
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802306 2716993,ChreCp042,rpoB1 (1 of 2) K03043 - DNA-directed RNA polymerase subunit beta (rpoB); RNA polymerase beta subunit I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATTCAGGTGGTGTTAATTGATAATAATCTGGATAAAAAAAGATTTCCA
Internal bar code:AGCTTTGACGGCGCAAGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGTGCATGTGTCTTAGT
Suggested primer 2:AAATAGCCGACCAAGCAGCT