Insertion junction: CLIP2.077612_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077612
Chromosome:chromosome 13
Location:3645432
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g588100 CYN19C,ROC2,CYN5,CYN19-3 (1 of 1) K09565 - peptidyl-prolyl isomerase F (cyclophilin D) (PPIF); Cyclophilin 19-3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCGTGGCTCTCGCCAACGCGGCGTCCCCACACGCCGAAGCAGTGTGT
Internal bar code:CCCTTTGTGGTCTCGGAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:31.8182
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTTGGATTGCTTGTGC
Suggested primer 2:ATGTGGGAGGAGGTATGGCT