Insertion junction: CLIP2.077614_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077614
Chromosome:chromosome 6
Location:4755380
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g279550 (1 of 62) PF00226 - DnaJ domain (DnaJ) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTGCCGTACACATACACGGCGATGTAGGCGGGCAGGTACACCAGCCG
Internal bar code:CATGCGCGGACGTTGGCGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTGGAAGGACATGAGC
Suggested primer 2:CCTAGCAACCTCTCACGCAA