Insertion junction: CLIP2.077618_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077618
Chromosome:chromosome 7
Location:1552151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g324800 SNE6 (1 of 8) PTHR10366//PTHR10366:SF411 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCGTTACGGGGCATCAGGGCCCGGCAATGGAGGACGGCGGCCTATA
Internal bar code:TGGATTATCGACTGGACTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:359
LEAP-Seq percent confirming:0.546448
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:182
LEAP-Seq n unique pos:183

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGTTCCTTCCACCGCTC
Suggested primer 2:CTGTGCTATTGGCCCCTCAA