Insertion junction: CLIP2.077626_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077626
Chromosome:chromosome 16
Location:6996985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673057 3'UTR
Cre16.g802000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAAACTCCCACGCCCATGCCCACACGGAGCATCAAGCTCACCAGTGG
Internal bar code:TGGCTGCCGGCAGTGACGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACACGATGCAGAGCACAGA
Suggested primer 2:GTTGAGATGTCCGGGTGTGT