Insertion junction: CLIP2.077629_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077629
Chromosome:chromosome 2
Location:3731178
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g100700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAGTCAGGGCAATCTTGGCAGCAATATCGGGGCTGTTCGGCTGCATT
Internal bar code:AAGGGAAATTGTCTCTGTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:38.4615
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCGGGAGATGAGTGAGT
Suggested primer 2:TGGGCGACATGCTAACAGTT