Insertion junction: CLIP2.077634_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077634
Chromosome:chromosome 3
Location:7710512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203700 DEGO1,DEG12 DegP-type protease-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGTGGACGTGGCTACGGGGGTAGTTGGAGACCGCCATTAGCACTGC
Internal bar code:AGTAAGTAAGCTTCGGAGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4986
LEAP-Seq percent confirming:93.9516
LEAP-Seq n confirming:233
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:248

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGATGTGGCTCAAGGAG
Suggested primer 2:CATAGGGTGAGCTGCTCTCG