Insertion junction: CLIP2.077635_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077635
Chromosome:chromosome 3
Location:5572768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTCGAAGAACCTGCATGTGCTATCATCAGTGCCTGCCTACTCGTCTGG
Internal bar code:TTAGTCTACTCTTGAAAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1030
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACAACCAGCAGCAACAG
Suggested primer 2:GAATGATGTGCAGACGCGAC