Insertion junction: CLIP2.077642_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077642
Chromosome:chromosome 6
Location:3014226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274450 SMM20 (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED; S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGTGTGGCTGCCTGTGAAGGCGCTGCCTTTATGTGCACAGTCCACAC
Internal bar code:ATAAACATCGCTTGGCCCACTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCCAACCTCCTCTCCATA
Suggested primer 2:CATATCACTGGGTCGCCCTC