Insertion junction: CLIP2.077643_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077643
Chromosome:chromosome 14
Location:2476179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624000 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGTGAGCGCAGTAACGCCACACCTCGTCAAGACTACTTCCAGCGCA
Internal bar code:ATTAGCGGTTCCAGGTATCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:469
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCACTTCGTTTGTTGCCC
Suggested primer 2:CAGCTTCCCAAGGACGATGT