Insertion junction: CLIP2.077647_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077647
Chromosome:chromosome 13
Location:1904268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATCATTGAAGTGTTCACGCCGACACAATAGTAATACACGCGCACTTG
Internal bar code:TGTGTCCTGGTGATGATCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1136
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTCTCCGCAATGAGTGT
Suggested primer 2:TCGCTCACCTTGAAGTCCAC