Insertion junction: CLIP2.077647_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077647
Chromosome:chromosome 13
Location:1904270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGATTTCTGTTGACTGCTGCTGCTTGCAAGCACGCGTGGTTGCTGACG
Internal bar code:TAAACTGATGTTATGAAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTCACCTTGAAGTCCAC
Suggested primer 2:ACGTTCTCCGCAATGAGTGT