Insertion junction: CLIP2.077651_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077651
Chromosome:chromosome 2
Location:4973361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110550 (1 of 24) PTHR10641 - MYB-LIKE DNA-BINDING PROTEIN MYB 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTATACATTCGCCAGTTTCTTGGCCAGTTTGCGACGGATGGCCCATAAT
Internal bar code:GTTGGTCTAGGCAATAATTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGACGCAGAGCACTTTA
Suggested primer 2:AGGGCATGTTGCGTTTGAAC