Insertion junction: CLIP2.077656_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077656
Chromosome:chromosome 10
Location:6626097
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATTCTACCTGGGCCTGCCCTAGACCTCTAACTTATACCGATTATCAG
Internal bar code:TCGCGTGATTTGTTTTCCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1295
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGAGGCGGAATTGTACAT
Suggested primer 2:GATACGAGCACTGCACGAGA