Insertion junction: CLIP2.077659_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077659
Chromosome:chromosome 17
Location:3207599
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721450 NSS4 (1 of 1) PTHR11819//PTHR11819:SF166 - SODIUM/SOLUTE SYMPORTER // SUBFAMILY NOT NAMED; Sodium:solute symporter 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTCCATCGAATTGTTCGCGAGCATGTGGCGGATTTTTGGGTCGTGC
Internal bar code:AGTTATTGTATATGTGGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:239
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCATTGAGGCCGTACACA
Suggested primer 2:GAGATACATCGTGCAGCGGA