Insertion junction: CLIP2.077660_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077660
Chromosome:chromosome 11
Location:1290467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467699 SEC1 Vesicle trafficking protein Sec1; (1 of 1) K15292 - syntaxin-binding protein 1 (STXBP1, MUNC18-1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGCCGTAGCCACGTTACACACGGTCTGGGGCCTGCGCCACCTGCACG
Internal bar code:CACGTTAAAAAGAGGATCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2446
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCGTGTAGATTCCAAAG
Suggested primer 2:AAGCCATTGCCGGTTTTGAC