Insertion junction: CLIP2.077660_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077660
Chromosome:chromosome 11
Location:1290476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467699 SEC1 Vesicle trafficking protein Sec1; (1 of 1) K15292 - syntaxin-binding protein 1 (STXBP1, MUNC18-1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTCGACGTTTCGCGGCGCAGGGGCTCTCGTCAGGACTGCCAGGTGCT
Internal bar code:CACGTTAAAAAGAGGATCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCATTGCCGGTTTTGAC
Suggested primer 2:CGCGCGTGTAGATTCCAAAG