Insertion junction: CLIP2.077678_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077678
Chromosome:chromosome 14
Location:1508381
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617700 PDE1,PDE2 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATACCGACCGGTTGAAATCTGCCCTACACAGAACACTCTCGTCAGACTC
Internal bar code:GTATACTGTTGTAATTTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:56.25
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGCCTATGGGAGACGGG
Suggested primer 2:CGGTGCACAGTGTTGAAGTG