Insertion junction: CLIP2.077679_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077679
Chromosome:chromosome 14
Location:1826739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619750 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGATGGCTTCAGCACGCATGGCACGTTTCCACGGGGCAATGCCCCCGTC
Internal bar code:TCTCGTGTAAGGATTTCGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3561
LEAP-Seq percent confirming:90.7692
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCAGGAACGTTGCTGGT
Suggested primer 2:CAGTTGCTTGAAGGGTGTGC