Insertion junction: CLIP2.077690_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077690
Chromosome:chromosome 17
Location:5244938
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g737350 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCATTAGGGCAGGCGTAAACCGCAGGGAGCATGCTTGCGGGCAATTCG
Internal bar code:GGATTTTGTCGGGCGTCAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:946
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACATACATGCTCACTGC
Suggested primer 2:CTTCCGCCGCAGATCTTTTG