Insertion junction: CLIP2.077703_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077703
Chromosome:chromosome 14
Location:3451577
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g630301 (1 of 1) IPR000104//IPR001890//IPR029058 - Antifreeze protein, type I // RNA-binding, CRM domain // Alpha/Beta hydrolase fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCCTCCTGCGCCTCCTTGGGTCCCCATTCCATTCCCGGGTTGGCGG
Internal bar code:CCTAAATAGATTAGACTCGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACTCACAACCTCAGACA
Suggested primer 2:GGATGTTTGGGACAGCGGTA