Insertion junction: CLIP2.077705_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077705
Chromosome:chromosome 2
Location:445990
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076000 LAT3,STK1,STPK1,SNRK2K (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; snRK1 family in Chlamydomonas, subgroup 2; Latrunculin-B sensitive 3 5'UTR
Cre02.g076050 (1 of 2) IPR000008//IPR000104 - C2 domain // Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTGGTGGACGGTGCAGTTGCTGGCACGGATCTTGAATGCCCCACCCT
Internal bar code:ATTTAGATACTATAATAACACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATCCGGACTTGGTGGTG
Suggested primer 2:GGGGGTGGGTTATCAAAGGG