Insertion junction: CLIP2.077708_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077708
Chromosome:chromosome 12
Location:3648655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513400 EBG1 Endo-1%252C3(4)-beta-glucanase; (1 of 1) 3.2.1.6 - Endo-1,3(4)-beta-glucanase / Laminarinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCAACCGCGTGTACAACGACCACCACTAGTGAGTGCGCGAGCCGCA
Internal bar code:AAGGTTAGAATCCGCCGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5272
LEAP-Seq percent confirming:65.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCGTAAACATGCATGG
Suggested primer 2:TTCACCACAGCCTCCATGTC