Insertion junction: CLIP2.077709_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077709
Chromosome:chromosome 10
Location:2323531
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g434450 NUOA9 (1 of 1) K03953 - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9 (NDUFA9); NADH:ubiquinone oxidoreductase 39 kDa subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACCTCACCGCCCCGACGCGACCCGATGAACAAACCACACCTTGTTGT
Internal bar code:ACGAGGCTTTGGTTCCGCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2969
LEAP-Seq percent confirming:97.2222
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGCCCTTCGACTCTGTG
Suggested primer 2:AGCTCCCACCCGTTGTATTG