Insertion junction: CLIP2.077712_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077712
Chromosome:chromosome 14
Location:943775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g613501 ZXE5 (1 of 9) PTHR13789//PTHR13789:SF186 - MONOOXYGENASE // SUBFAMILY NOT NAMED; Putative zeaxanthin epoxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCACGGAGCTTTAAGACTTTTCCTCTCGACTACCCCATCCCCGCTCCG
Internal bar code:TGTGTAGCCTCTAGTATAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1570
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAGGTTGCTCTCACCGT
Suggested primer 2:TCCCAACAACCCTCTGCATC