Insertion junction: CLIP2.077718_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077718
Chromosome:chromosome 6
Location:3216109
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g276600 HTR2 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCTTGCGGATCAGCAGCTCAGTGGACTTCTGGTACTTGCGAATCTCG
Internal bar code:TGCCATCCGGCTCACCGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:357
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTGCCTTGTTTCCCCTC
Suggested primer 2:TCTGGCTGTGATTGAGCAGG