Insertion junction: CLIP2.077729_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077729
Chromosome:chromosome 9
Location:2133988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395900 CSV3 Chlamydomonas-specific family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGCCGCACAACCTGGCTGAGGAAATGCAAACGTGACAACAATACCCC
Internal bar code:TCGAAGGTGACCCGCCAGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:60.5263
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGATGGTCCCGTCTTG
Suggested primer 2:TACCTGACCCCATTCGGCTA