Insertion junction: CLIP2.077742_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077742
Chromosome:plastome
Location:19425
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802270 petB,ChreCp008,2717017 cytochrome b6; (1 of 1) K02635 - cytochrome b6 (petB) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGACTAAAAAAATGTGTAGCTTAATTATTTAAAGTTTAAATTAAAGTT
Internal bar code:GCTCTCTTAATCAATCGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:19.0476
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCCCATAACCTCCGTA
Suggested primer 2:CGTGGACGTTTGAAACCACC