Insertion junction: CLIP2.077745_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077745
Chromosome:chromosome 12
Location:309357
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g485600 SNRK2M (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTACACGGGCGTGCCGATGCGTGTGTTCATCTGGCTGTTGTCGTCCC
Internal bar code:CACTAGAAGGGTCTAGACACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGGGGATAGGGGAGGGGA
Suggested primer 2:GACCTGGTCCATGTCTGTGG