Insertion junction: CLIP2.077749_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077749
Chromosome:chromosome 17
Location:4342420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g730400 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCCCCTCGTGATAATGGGCGGTGGGCGTGCCGTACGTGCGGCCGTGT
Internal bar code:TGAGAGTAACCGTGGGTTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACGTCTGTGTTTGTGC
Suggested primer 2:TTCATCCCATGTGCAGGACC